STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1410KEGG: mxa:MXAN_5528 hypothetical protein. (352 aa)    
Predicted Functional Partners:
Xcel_0277
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: acr:Acry_1166 triple helix repeat-containing collagen.
  
     0.574
Xcel_3191
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: acp:A2cp1_0462 exonuclease SbcC.
  
     0.568
Xcel_3314
Hypothetical protein.
  
     0.556
Xcel_0148
TIGRFAM: conserved repeat domain protein; KEGG: bcr:BCAH187_A3696 conserved repeat domain protein.
  
     0.555
Xcel_2416
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: GK17577 gene product from transcript GK17577- RA.
  
     0.547
Xcel_1199
Hypothetical protein.
  
     0.540
Xcel_1411
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_4309 ABC transporter ATP-binding protein.
       0.508
Xcel_3198
Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bac:BamMC406_3145 AraC family transcriptional regulator.
  
     0.474
Xcel_2894
KEGG: dps:DPPB78 hypothetical protein.
  
     0.438
Xcel_2654
PFAM: glycoside hydrolase family 43; KEGG: mxa:MXAN_5247 glycosyl hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.433
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.