STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1414Hypothetical protein. (84 aa)    
Predicted Functional Partners:
Xcel_1415
Hypothetical protein.
 
     0.874
Xcel_1413
KEGG: bpe:BP3738 hypothetical protein.
       0.819
Xcel_0985
PFAM: Phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein.
  
     0.625
Xcel_1416
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mca:MCA2001 3-oxoacyl-(acyl-carrier-protein) reductase.
       0.472
Xcel_1417
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_6034 enoyl-(acyl carrier protein) reductase.
       0.466
Xcel_2491
TIGRFAM: anti-sigma factor; KEGG: mxa:MXAN_6460 hypothetical protein.
  
     0.453
Xcel_2550
KEGG: met:M446_5306 hypothetical protein.
  
     0.424
Xcel_1426
Hypothetical protein.
  
     0.413
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.