STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1426Hypothetical protein. (260 aa)    
Predicted Functional Partners:
Xcel_2227
PFAM: metallophosphoesterase; KEGG: serine/threonine-protein kinase C.
  
     0.762
Xcel_3140
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein.
  
     0.722
Xcel_0985
PFAM: Phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein.
  
     0.688
Xcel_1250
Hypothetical protein.
  
     0.683
Xcel_0273
KEGG: hch:HCH_01581 hypothetical protein.
  
     0.647
Xcel_0010
KEGG: Hypothetical protein CBG04830.
  
     0.646
Xcel_1249
Hypothetical protein.
  
     0.641
Xcel_1103
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
     0.636
Xcel_1428
PFAM: protein of unknown function DUF107; KEGG: mxa:MXAN_3983 NfeD family protein.
     
 0.634
Xcel_0286
PFAM: HesB/YadR/YfhF-family protein; KEGG: rpb:RPB_0979 HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
     0.628
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.