STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1432PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5645 carbohydrate ABC transporter. (661 aa)    
Predicted Functional Partners:
Xcel_2307
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_3521 ABC transporter related.
 
 
   
0.900
Xcel_2810
PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; KEGG: mno:Mnod_6773 spermidine/putrescine ABC transporter ATPase subunit.
 
     
0.900
Xcel_1616
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_3234 ABC transporter related.
 
     
0.899
fbpC
ABC transporter related protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
     
0.899
Xcel_0931
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000258 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.898
Xcel_2751
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA0809 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.891
Xcel_0101
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80063 putative ATP-binding component of ABC transporter.
 
     
0.855
Xcel_2950
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
 
     
0.852
Xcel_1431
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: scl:sce5644 carbohydrate ABC transporter.
 
    
0.832
Xcel_1430
PFAM: regulatory protein TetR; KEGG: scl:sce5643 TetR family transcriptional regulator.
       0.774
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.