STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1449PFAM: transport system permease protein; KEGG: ppg:PputGB1_1806 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (347 aa)    
Predicted Functional Partners:
Xcel_1448
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dac:Daci_3149 ABC transporter related.
  
 0.957
Xcel_1451
PFAM: periplasmic binding protein; KEGG: oan:Oant_4084 periplasmic binding protein.
 
  
 0.949
Xcel_1450
PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.882
Xcel_2174
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3413 ABC Fe+3-siderophore transporter, ATPase subunit.
  
 0.857
Xcel_3056
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ABC transporter related; K02013 iron complex transport system ATP-binding protein.
  
 0.855
Xcel_2307
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_3521 ABC transporter related.
  
 0.850
Xcel_1447
PFAM: putative esterase; KEGG: esa:ESA_02729 enterobactin/ferric enterobactin esterase.
  
  
 0.806
hmuV
ABC transporter related protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
    0.721
Xcel_1452
PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: cti:RALTA_B1102 siderophore-interacting protein.
  
    0.601
Xcel_1453
KEGG: rsq:Rsph17025_0585 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1.
       0.545
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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