STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1476KEGG: hypothetical protein. (95 aa)    
Predicted Functional Partners:
Xcel_1475
Hypothetical protein.
 
     0.888
Xcel_2490
KEGG: mms:mma_0681 acyl-CoA thioesterase I precursor.
  
     0.774
Xcel_0783
PFAM: aminoglycoside phosphotransferase; KEGG: eum:ECUMN_4827 macrolide 2'- phosphotransferase I.
  
     0.750
Xcel_3034
KEGG: hypothetical protein.
  
     0.714
Xcel_2502
Hypothetical protein.
  
     0.712
Xcel_1057
Hypothetical protein; KEGG: cell-surface adhesin.
  
     0.676
Xcel_2284
Hypothetical protein; KEGG: xca:xccb100_3359 DNA polymerase III tau and gamma subunits.
  
     0.659
Xcel_2500
Hypothetical protein.
  
     0.652
Xcel_1931
Hypothetical protein.
  
     0.645
Xcel_2036
KEGG: hypothetical protein.
  
     0.623
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.