STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1507PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll4342 phosphinotricin acetyltransferase. (210 aa)    
Predicted Functional Partners:
Xcel_1506
PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; KEGG: gur:Gura_1146 response regulator receiver/ANTAR domain-containing protein.
       0.773
Xcel_3007
KEGG: fibrocystin-L-like protein.
 
     0.704
Xcel_3034
KEGG: hypothetical protein.
  
     0.678
Xcel_2819
Hypothetical protein; KEGG: mch:Mchl_4744 putative superfamily I DNA and RNA helicase protein.
  
     0.640
Xcel_2424
KEGG: similar to hedgehog protein.
  
    0.633
Xcel_2251
KEGG: hypothetical protein.
  
     0.610
Xcel_0686
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pna:Pnap_1448 putative transcriptional regulator, MerR family.
  
     0.602
Xcel_2499
Hypothetical protein; KEGG: GK23094 gene product from transcript GK23094- RA.
  
     0.602
Xcel_2407
Hypothetical protein; KEGG: ank:AnaeK_0563 thermosensitive mutation transmembrane protein, SuhR.
 
    0.595
Xcel_2227
PFAM: metallophosphoesterase; KEGG: serine/threonine-protein kinase C.
  
     0.583
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.