STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1535Hypothetical protein. (303 aa)    
Predicted Functional Partners:
Xcel_1536
Hypothetical protein.
       0.773
Xcel_2500
Hypothetical protein.
  
     0.715
Xcel_1032
PFAM: type II secretion system protein; KEGG: bav:BAV2284 pilus assembly protein.
  
     0.637
Xcel_2032
Hypothetical protein; KEGG: ank:AnaeK_2647 putative CheA signal transduction histidine kinase.
  
     0.563
Xcel_2499
Hypothetical protein; KEGG: GK23094 gene product from transcript GK23094- RA.
  
     0.541
Xcel_2502
Hypothetical protein.
  
     0.526
Xcel_0084
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; PT repeat-containing protein; KEGG: similar to microtubule-associated protein 6.
  
     0.498
Xcel_1103
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
     0.466
Xcel_2482
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: hypothetical protein.
  
     0.466
Xcel_1029
PFAM: TadE family protein; KEGG: bam:Bamb_6296 TadE family protein.
  
     0.464
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.