STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1637Conserved hypothetical protein; KEGG: ank:AnaeK_3600 hemerythrin HHE cation binding domain protein. (106 aa)    
Predicted Functional Partners:
Xcel_1638
Putative transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcr:BCAH187_A4375 hypothetical protein.
 
     0.902
Xcel_1639
KEGG: mag:amb1262 hypothetical protein.
 
     0.895
Xcel_1640
KEGG: dar:Daro_2383 hypothetical protein.
 
     0.890
Xcel_1641
PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; KEGG: bte:BTH_II0944 mulitcopper oxidase domain- containing protein.
 
     0.890
Xcel_1503
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
   
    0.541
Xcel_1636
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: mxa:MXAN_0560 penicillin-resistant dd- carboxypeptidase.
       0.457
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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