STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1639KEGG: mag:amb1262 hypothetical protein. (382 aa)    
Predicted Functional Partners:
Xcel_1641
PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; KEGG: bte:BTH_II0944 mulitcopper oxidase domain- containing protein.
     0.995
Xcel_1640
KEGG: dar:Daro_2383 hypothetical protein.
     0.958
Xcel_1637
Conserved hypothetical protein; KEGG: ank:AnaeK_3600 hemerythrin HHE cation binding domain protein.
 
     0.895
Xcel_1638
Putative transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcr:BCAH187_A4375 hypothetical protein.
 
     0.885
Xcel_1642
PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_4522 hypothetical protein.
       0.509
Xcel_0137
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: mpo:Mpop_3746 multi-sensor signal transduction histidine kinase.
  
     0.433
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.