STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1650PFAM: protein of unknown function DUF664. (179 aa)    
Predicted Functional Partners:
Xcel_1651
PFAM: Uracil-DNA glycosylase superfamily; KEGG: ade:Adeh_3631 uracil-DNA glycosylase superfamily protein.
       0.773
Xcel_0945
PFAM: pentapeptide repeat protein; KEGG: scl:sce2720 hypothetical protein.
 
     0.666
Xcel_0229
Hypothetical protein.
  
     0.604
Xcel_0140
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swd:Swoo_1852 hypothetical protein.
 
     0.581
Xcel_3298
Hypothetical protein.
  
   
 0.564
Xcel_1976
KEGG: rlt:Rleg2_1526 hypothetical protein.
 
     0.555
Xcel_1652
Hypothetical protein.
 
     0.538
Xcel_1648
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eca:ECA2140 putative oxidoreductase.
       0.501
Xcel_1649
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:RL0094 GFO/IDH/MocA family oxidoreductase.
       0.501
mca
Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
     0.446
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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