STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1652Hypothetical protein. (150 aa)    
Predicted Functional Partners:
Xcel_1650
PFAM: protein of unknown function DUF664.
 
     0.538
Xcel_1109
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
     0.455
Xcel_1653
Hypothetical protein.
 
    
0.430
Xcel_1651
PFAM: Uracil-DNA glycosylase superfamily; KEGG: ade:Adeh_3631 uracil-DNA glycosylase superfamily protein.
       0.417
Xcel_1869
PFAM: Patatin; KEGG: reh:H16_B1747 hypothetical protein.
  
     0.414
Xcel_0185
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3153 hypothetical ABC transporter extracellular binding protein YurO precursor.
  
     0.411
Xcel_0184
PFAM: GCN5-related N-acetyltransferase; KEGG: csa:Csal_1153 GCN5-related N- acetyltransferase.
  
     0.400
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.