STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1697PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: pla:Plav_2904 glycerophosphoryl diester phosphodiesterase. (276 aa)    
Predicted Functional Partners:
Xcel_3080
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cti:RALTA_A1871 glycerophosphoryl diester phosphodiesterase.
  
  
 
0.928
Xcel_1698
KEGG: abb:ABBFA_001367 alpha/beta hydrolase fold family protein.
     
 0.796
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.667
Xcel_2024
PFAM: protein of unknown function DUF161; KEGG: pzu:PHZ_c3114 hypothetical protein.
      0.666
Xcel_1700
PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_2937 major facilitator superfamily transporter.
 
     0.635
Xcel_1699
Lactate 2-monooxygenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: oxidoreductase.
       0.561
nhaA-2
Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
       0.512
Xcel_0391
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_2018 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.458
Xcel_0390
PFAM: major intrinsic protein; KEGG: azc:AZC_2711 glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.414
Xcel_0741
PFAM: major intrinsic protein; KEGG: sil:SPO0970 aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.414
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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