STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1701PFAM: Domain of unknown function DUF1801; KEGG: ccs:CCNA_03530 hypothetical protein. (120 aa)    
Predicted Functional Partners:
Xcel_1700
PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_2937 major facilitator superfamily transporter.
       0.570
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.529
Xcel_0111
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mlo:mll2156 hypothetical protein.
 
     0.503
Xcel_1011
PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC5071 macrolide-efflux protein.
 
     0.471
Xcel_1699
Lactate 2-monooxygenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: oxidoreductase.
       0.467
Xcel_1703
KEGG: hypothetical protein.
       0.408
Xcel_1704
KEGG: cak:Caul_4167 hypothetical protein.
       0.401
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.