STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1763Hypothetical protein. (157 aa)    
Predicted Functional Partners:
Xcel_1761
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B0885 putative lyase.
       0.702
Xcel_1762
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cti:RALTA_B0884 putative transcriptional regulator, AraC family, isolated domain.
       0.702
Xcel_1760
PFAM: ABC transporter related; KEGG: scl:sce6315 excinuclease ABC subunit A.
       0.679
Xcel_1764
PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO4118 alpha/beta family hydrolase.
       0.560
Xcel_1642
PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_4522 hypothetical protein.
  
     0.498
Xcel_1349
PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3954 GCN5-related N- acetyltransferase.
  
     0.477
Xcel_2194
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rlt:Rleg2_5436 transcriptional regulator, LuxR family.
  
     0.446
Xcel_1870
PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce1315 phosphotransferase.
  
     0.425
Xcel_3277
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: rlt:Rleg2_5436 transcriptional regulator, LuxR family.
  
     0.407
Xcel_3302
Hypothetical protein; KEGG: bpm:BURPS1710b_A1613 rhs element Vgr protein.
  
     0.407
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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