STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1814TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: mfa:Mfla_0318 nitrite reductase (NAD(P)H) large subunit, NirD. (148 aa)    
Predicted Functional Partners:
Xcel_1815
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: reu:Reut_B4860 assimilatory nitrite reductase (NAD(P)H) large subunit precursor.
 0.998
Xcel_1624
TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: rme:Rmet_4818 assimilatory nitrite reductase (NAD(P)H) large subunit precursor.
 0.995
Xcel_1820
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: scl:sce1150 nitrite reductase (NAD(P)H).
 
 0.972
Xcel_1822
PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2806 nitrite extrusion protein.
 
 
 0.965
Xcel_1825
TIGRFAM: nitrate reductase, beta subunit; KEGG: bsu:BSU37270 nitrate reductase (beta subunit).
  
 
 0.965
Xcel_1824
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bcy:Bcer98_3399 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.952
Xcel_1827
KEGG: bcr:BCAH187_A2278 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit.
  
 
 0.946
Xcel_2044
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_2593 major facilitator transporter.
  
 
 0.939
Xcel_1828
PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_2929 major facilitator transporter.
 
 
 0.938
Xcel_1821
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: msl:Msil_3772 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.928
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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