STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1847PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bsu:BSU11470 oligopeptide ABC transporter ATP- binding protein; Belongs to the ABC transporter superfamily. (292 aa)    
Predicted Functional Partners:
Xcel_1849
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A1340 oligopeptide ABC transporter, permease protein.
 
 0.999
Xcel_0954
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV1646 ABC transporter, permease protein.
 
 0.998
Xcel_1850
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcr:BCAH187_A1339 oligopeptide ABC transporter, permease protein.
 
 0.996
Xcel_1851
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: bcz:BCZK1683 oligopeptide ABC transporter, oligopeptide-binding protein, OppA-like.
 
 0.991
Xcel_1848
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: bce:BC1182 oligopeptide transport ATP-binding protein OppD; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
0.988
Xcel_0953
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2014 ABC transporter permease protein.
 
 0.982
Xcel_3167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0469 ABC transporter, permease.
  
 0.981
Xcel_0959
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component.
  
 0.980
Xcel_3150
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: binding-protein-dependent transport systems inner membrane component.
  
 0.978
Xcel_3262
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA0135 ABC transporter permease protein.
  
 0.954
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.