STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1852PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7689 ABC transporter related. (304 aa)    
Predicted Functional Partners:
Xcel_1853
KEGG: NEF1-like protein.
   0.970
Xcel_1855
Hypothetical protein; KEGG: bbt:BBta_4512 phosphatidate cytidylyltransferase.
 
 
 0.962
Xcel_1854
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7687 ABC transporter related.
 
    
0.820
Xcel_2950
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
 
     
0.817
Xcel_0380
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1439 lipoprotein releasing system, ATP-binding protein.
 
    
0.599
Xcel_2529
KEGG: aeh:Mlg_0732 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase.
 
     
0.569
Xcel_1247
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_2987 ABC transporter related.
 
     
0.469
Xcel_1856
PFAM: AMP-dependent synthetase and ligase; KEGG: mxa:MXAN_2959 putative long-chain-fatty-acid-- CoA ligase.
  
   0.468
Xcel_1851
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: bcz:BCZK1683 oligopeptide ABC transporter, oligopeptide-binding protein, OppA-like.
       0.466
fbpC
ABC transporter related protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
     
0.451
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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