STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1855Hypothetical protein; KEGG: bbt:BBta_4512 phosphatidate cytidylyltransferase. (237 aa)    
Predicted Functional Partners:
Xcel_1852
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7689 ABC transporter related.
 
 
 0.962
Xcel_1854
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7687 ABC transporter related.
 
 
 0.962
Xcel_1853
KEGG: NEF1-like protein.
 
     0.943
Xcel_3123
KEGG: bbt:BBta_3059 hypothetical protein.
  
     0.557
Xcel_0273
KEGG: hch:HCH_01581 hypothetical protein.
  
     0.538
Xcel_1269
KEGG: pin:Ping_0445 colicin uptake-like protein.
  
     0.470
Xcel_1077
KEGG: xca:xccb100_1233 hypothetical protein.
  
     0.457
Xcel_0057
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.446
Xcel_0096
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6827 sodium ABC transporter ATP- binding protein NatA.
  
 
 0.446
Xcel_0145
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1003 ABC transporter ATP-binding protein.
  
 
 0.446
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.