STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1865Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: swi:Swit_0625 ArsR family transcriptional regulator. (105 aa)    
Predicted Functional Partners:
Xcel_1866
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cti:RALTA_B1837 conserved hypothetical protein, DUF704.
    0.981
Xcel_1867
SMART: Rhodanese domain protein; KEGG: hypothetical protein.
  
    0.582
Xcel_0745
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: xau:Xaut_1920 activator of HSP90 ATPase 1 family protein.
  
     0.538
Xcel_2171
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: mxa:MXAN_3702 transcriptional regulator, Fur family; Belongs to the Fur family.
  
  
 0.444
Xcel_1797
PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_PC0000110 putative riboflavin biosynthesis protein.
  
     0.409
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.