STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1876PFAM: bifunctional deaminase-reductase domain protein; KEGG: met:M446_6866 deaminase-reductase domain- containing protein. (206 aa)    
Predicted Functional Partners:
Xcel_1877
PFAM: Chorismate binding-like; KEGG: met:M446_0053 para-aminobenzoate synthase, subunit I.
     
 0.780
Xcel_1875
PFAM: aminotransferase class IV; KEGG: azc:AZC_1597 4-amino-4-deoxychorismate lyase.
     
 0.776
Xcel_0902
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3912 bifunctional deaminase- reductase-like.
 
     0.730
Xcel_0181
PFAM: bifunctional deaminase-reductase domain protein; KEGG: oan:Oant_1327 bifunctional deaminase- reductase domain protein.
 
     0.717
Xcel_1400
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ank:AnaeK_4011 bifunctional deaminase- reductase domain protein.
 
     0.680
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
  
 0.604
Xcel_1754
PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mlr0926 hypothetical protein.
 
     0.596
Xcel_1874
Hypothetical protein.
       0.447
Xcel_1866
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: cti:RALTA_B1837 conserved hypothetical protein, DUF704.
 
     0.424
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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