STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1885Hypothetical protein. (176 aa)    
Predicted Functional Partners:
Xcel_1884
PFAM: bifunctional deaminase-reductase domain protein; KEGG: msl:Msil_2108 riboflavin biosynthesis protein RibD.
       0.619
Xcel_2550
KEGG: met:M446_5306 hypothetical protein.
  
     0.599
Xcel_0169
Hypothetical protein; KEGG: Hdgfl1; hepatoma derived growth factor-like 1.
  
     0.527
Xcel_1497
Hypothetical protein; KEGG: GK24882 gene product from transcript GK24882- RA.
  
     0.524
Xcel_0974
KEGG: hypothetical protein.
  
     0.510
Xcel_2503
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
     0.510
Xcel_1883
PFAM: AFG1-family ATPase; KEGG: jan:Jann_0056 AFG1-like ATPase.
       0.509
Xcel_2634
KEGG: acp:A2cp1_2377 secretion protein HlyD family protein.
  
     0.498
Xcel_0960
Hypothetical protein.
  
     0.497
Xcel_2928
KEGG: nha:Nham_3709 hypothetical protein.
  
     0.497
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.