STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1923Hypothetical protein. (164 aa)    
Predicted Functional Partners:
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.665
Xcel_1440
KEGG: azo:azo3956 hypothetical protein.
  
     0.562
Xcel_1439
KEGG: scl:sce9075 hypothetical protein.
  
     0.557
Xcel_1220
Hypothetical protein.
  
     0.546
Xcel_1921
Hypothetical protein.
       0.536
Xcel_1919
KEGG: ade:Adeh_2996 hypothetical protein.
       0.529
Xcel_1512
PFAM: protein of unknown function DUF606; KEGG: pmr:PMI1526 hypothetical protein.
  
     0.520
Xcel_1920
PFAM: nucleic acid binding OB-fold tRNA/helicase- type.
       0.481
Xcel_2424
KEGG: similar to hedgehog protein.
  
     0.475
Xcel_0904
PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase.
  
     0.466
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.