STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1927Hypothetical protein; KEGG: ade:Adeh_1135 serine/threonine protein kinase. (397 aa)    
Predicted Functional Partners:
Xcel_2210
TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: scl:sce8316 competence protein.
 
  
 0.695
Xcel_1924
Hypothetical protein.
 
     0.690
Xcel_1928
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pen:PSEEN2266 hypothetical protein.
       0.689
Xcel_2425
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
  
     0.616
Xcel_2547
KEGG: hypothetical protein.
  
     0.613
Xcel_1925
PFAM: inositol monophosphatase; KEGG: mxa:MXAN_1914 inositol-1-monophosphatase.
       0.587
Xcel_2424
KEGG: similar to hedgehog protein.
  
   
 0.586
Xcel_1926
PFAM: protein of unknown function UPF0126; KEGG: rpa:RPA2993 hypothetical protein.
       0.579
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.568
Xcel_2819
Hypothetical protein; KEGG: mch:Mchl_4744 putative superfamily I DNA and RNA helicase protein.
  
     0.565
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.