STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1945KEGG: mag:amb1895 hypothetical protein. (87 aa)    
Predicted Functional Partners:
Xcel_1942
KEGG: SNF2 superfamily protein.
       0.773
Xcel_1943
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: gsu:GSU0972 AAA family ATPase.
       0.773
Xcel_1944
Hypothetical protein; KEGG: acp:A2cp1_2916 PBS lyase heat domain protein repeat-containing protein.
       0.773
Xcel_1946
KEGG: bba:Bd2133 hypothetical protein.
       0.773
Xcel_1947
Hypothetical protein; KEGG: AMOT; angiomotin.
       0.773
Xcel_1941
Hypothetical protein.
       0.768
Xcel_1948
PFAM: Collagen triple helix repeat; KEGG: hypothetical protein.
       0.686
Xcel_1949
TIGRFAM: phage tail protein; PFAM: NHL repeat containing protein; KEGG: rsq:Rsph17025_4353 hypothetical protein.
       0.553
Xcel_1950
KEGG: gsu:GSU0988 hypothetical protein.
       0.553
Xcel_1951
PFAM: GPW/gp25 family protein; KEGG: rsq:Rsph17025_4351 hypothetical protein.
       0.553
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.