STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1979PFAM: flavin reductase domain protein FMN-binding; KEGG: bxe:Bxe_A0737 putative flavin reductase-like protein. (166 aa)    
Predicted Functional Partners:
Xcel_1978
PFAM: NADPH-dependent FMN reductase; KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein.
 
   
 0.864
Xcel_1980
PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: xcb:XC_0579 dicarboxylate carrier protein.
       0.522
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
  
 0.493
Xcel_1977
TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cak:Caul_2586 BadM/Rrf2 family transcriptional regulator.
       0.459
Xcel_0431
PFAM: Luciferase-like monooxygenase; KEGG: rle:pRL100402 putative sulfonate monooxygenase.
 
  
 0.429
Xcel_0436
KEGG: mlo:mll9181 hypothetical protein.
 
    0.425
Xcel_0433
Monooxygenase; KEGG: scl:sce0168 monooxygenase.
 
  
 0.421
Xcel_2353
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: smt:Smal_3622 luciferase-like monooxygenase.
 
  
 0.402
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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