STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1993Hypothetical protein; KEGG: acp:A2cp1_0462 exonuclease SbcC. (389 aa)    
Predicted Functional Partners:
Xcel_1992
PFAM: UspA domain protein; KEGG: UspA domain protein.
       0.784
Xcel_0010
KEGG: Hypothetical protein CBG04830.
  
     0.741
Xcel_2547
KEGG: hypothetical protein.
  
     0.661
Xcel_2497
KEGG: Os02g0711100; hypothetical protein.
  
     0.609
Xcel_2425
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
  
     0.591
Xcel_2816
PFAM: SAF domain protein; KEGG: bpy:Bphyt_1652 Flp pilus assembly protein CpaB.
  
     0.584
Xcel_3034
KEGG: hypothetical protein.
  
     0.582
Xcel_2423
Hypothetical protein; KEGG: vco:VC0395_A1354 HlyD family secretion protein.
  
     0.577
Xcel_2146
Hypothetical protein.
  
     0.571
Xcel_0736
KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.564
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.