STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1996Hypothetical protein. (123 aa)    
Predicted Functional Partners:
Xcel_1997
PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase.
     
 0.690
Xcel_2226
PFAM: iron dependent repressor; regulatory protein GntR HTH; FeoA family protein; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
   
    0.687
Xcel_1513
PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: ank:AnaeK_1219 methyltransferase type 11.
  
     0.643
Xcel_2036
KEGG: hypothetical protein.
  
     0.636
Xcel_1890
Hypothetical protein.
  
     0.603
cobB
Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.587
Xcel_1732
Hypothetical protein.
  
     0.569
Xcel_2595
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bcy:Bcer98_3735 cell envelope-related transcriptional attenuator.
   
    0.559
Xcel_1661
Hypothetical protein.
  
     0.491
Xcel_3092
Hypothetical protein.
  
     0.443
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.