STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2002TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase. (314 aa)    
Predicted Functional Partners:
Xcel_1048
PFAM: ROK family protein; KEGG: glo:Glov_1263 ROK family protein.
  
  
 
0.927
Xcel_2049
PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein.
  
  
0.927
Xcel_2121
PFAM: ROK family protein; KEGG: gur:Gura_2075 ROK family protein.
  
  
 
0.925
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: acp:A2cp1_3272 glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.917
Xcel_0657
PFAM: ROK family protein; KEGG: afw:Anae109_4035 ROK family protein.
     
 0.910
Xcel_0168
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
     
 0.908
Xcel_3203
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: vpa:VP0793 glucose-specific PTS system component.
  
 
 0.907
Xcel_2489
PFAM: Aldose 1-epimerase; KEGG: esa:ESA_04055 hypothetical protein.
    
 0.906
Xcel_0920
PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich; KEGG: bha:BH2723 beta-galactosidase.
     
 0.901
Xcel_3359
TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: sme:SM_b20249 putative myo-inositol-1- phosphate synthase.
     
  0.900
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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