STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2048Hypothetical protein. (74 aa)    
Predicted Functional Partners:
Xcel_2049
PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein.
       0.668
Xcel_2047
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sat:SYN_01628 glutamine synthetase.
       0.653
Xcel_2046
Glutamate-ammonia ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]
       0.583
Xcel_2284
Hypothetical protein; KEGG: xca:xccb100_3359 DNA polymerase III tau and gamma subunits.
  
     0.565
Xcel_1057
Hypothetical protein; KEGG: cell-surface adhesin.
  
    0.553
Xcel_0934
PFAM: regulatory protein TetR; KEGG: rlt:Rleg2_4786 transcriptional regulator, TetR family.
  
     0.423
Xcel_2009
PFAM: cytochrome c class I; KEGG: tbd:Tbd_2545 putative cytochrome c.
  
     0.419
Xcel_1259
PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM.
  
     0.402
Xcel_1476
KEGG: hypothetical protein.
  
     0.400
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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