STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2049PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein. (258 aa)    
Predicted Functional Partners:
Xcel_1048
PFAM: ROK family protein; KEGG: glo:Glov_1263 ROK family protein.
  
  
 0.941
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: acp:A2cp1_3272 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.932
Xcel_2002
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase.
  
  
0.930
Xcel_2121
PFAM: ROK family protein; KEGG: gur:Gura_2075 ROK family protein.
  
  
0.930
Xcel_0657
PFAM: ROK family protein; KEGG: afw:Anae109_4035 ROK family protein.
  
  
 
0.926
Xcel_0168
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
    
 0.915
Xcel_2489
PFAM: Aldose 1-epimerase; KEGG: esa:ESA_04055 hypothetical protein.
    
 0.906
Xcel_3203
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: vpa:VP0793 glucose-specific PTS system component.
  
 
 0.906
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.865
Xcel_0694
PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mex:Mext_0040 putative phosphoketolase.
     
 0.819
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.