STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2086PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; KEGG: wsu:WS0651 sulfate transporter sulfate transporter family protein. (554 aa)    
Predicted Functional Partners:
Xcel_0936
PFAM: carbonic anhydrase; KEGG: mno:Mnod_1487 carbonic anhydrase.
  
 0.937
Xcel_2863
PFAM: Ankyrin; SMART: Ankyrin; KEGG: sfu:Sfum_1848 ankyrin.
    
 
 0.802
Xcel_2011
PFAM: Cytochrome b/b6 domain; KEGG: sus:Acid_6208 cytochrome b/b6 domain- containing protein.
    
   0.778
Xcel_0481
KEGG: dds:Ddes_1656 proton-translocating NADH- quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.736
Xcel_0870
KEGG: hypothetical protein.
    
   0.702
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
   0.676
Xcel_2083
PFAM: Phosphoglycerate mutase; ribonuclease H; KEGG: mxa:MXAN_5728 ribonuclease H.
  
    0.564
Xcel_2084
PFAM: protein of unknown function DUF164; KEGG: glo:Glov_0682 protein of unknown function DUF164.
       0.558
Xcel_2085
PFAM: protein of unknown function DUF34; KEGG: dal:Dalk_3075 protein of unknown function DUF34.
       0.558
Xcel_3187
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: tcx:Tcr_0063 putative monovalent cation/H+ antiporter subunit A.
  
  
 0.444
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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