STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2096PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bur:Bcep18194_B2541 AsnC family transcriptional regulator. (157 aa)    
Predicted Functional Partners:
Xcel_2103
PFAM: MaoC domain protein dehydratase; KEGG: pla:Plav_2683 dehydratase.
 
    0.642
Xcel_2104
PFAM: HpcH/HpaI aldolase; KEGG: msl:Msil_3436 HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
     0.621
Xcel_2101
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rce:RC1_0381 methylcrotonoyl-CoA carboxylase subunit alpha.
 
   
 0.583
Xcel_2098
PFAM: Transketolase central region; Transketolase domain protein; KEGG: afw:Anae109_1994 transketolase central region.
     
 0.578
Xcel_2097
PFAM: dehydrogenase E1 component; KEGG: gsu:GSU2654 pyruvate dehydrogenase complex E1 component, alpha subunit.
     
 0.572
Xcel_2099
PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: ade:Adeh_1825 pyruvate dehydrogenase-like complex E2 component.
       0.560
Xcel_2100
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: cak:Caul_3154 propionyl-CoA carboxylase.
       0.526
Xcel_2102
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: bha:BH1130 butyryl-CoA dehydrogenase.
       0.526
Xcel_2105
KEGG: mno:Mnod_6364 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.
       0.526
Xcel_2106
KEGG: hne:HNE_2893 3-oxoadipate CoA-succinyl transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
       0.526
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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