STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2123N-acylglucosamine-6-phosphate 2-epimerase; PFAM: putative N-acetylmannosamine-6-phosphate epimerase; deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: esa:ESA_00529 N-acetylmannosamine-6-phosphate 2-epimerase. (240 aa)    
Predicted Functional Partners:
Xcel_2442
N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: gdi:GDI2579 putative N-acetylglucosamine-6- phosphate deacetylase.
 
  
 0.954
Xcel_2121
PFAM: ROK family protein; KEGG: gur:Gura_2075 ROK family protein.
  
 0.924
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
 
   
 0.829
Xcel_2126
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_4641 oxidoreductase domain protein.
 
    0.794
Xcel_2125
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sus:Acid_5142 oxidoreductase domain- containing protein.
 
    0.793
Xcel_2002
TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase.
 
  
 0.783
Xcel_2120
KEGG: pzu:PHZ_c1045 hypothetical protein.
 
     0.770
Xcel_2124
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rde:RD1_0217 myo-inositol dehydrogenase.
  
    0.763
Xcel_2117
PFAM: protein of unknown function DUF187; KEGG: oan:Oant_1822 protein of unknown function DUF187.
 
     0.689
Xcel_2122
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH0419 GntR family transcriptional regulator.
 
     0.613
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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