STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2131Hypothetical protein. (136 aa)    
Predicted Functional Partners:
Xcel_2130
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pzu:PHZ_p0072 peroxiredoxin.
  
  
 0.882
Xcel_1924
Hypothetical protein.
  
     0.753
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.748
Xcel_1203
PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_1267 hypothetical protein.
  
     0.747
Xcel_2545
Hypothetical protein; KEGG: DSG4; desmoglein 4; K07599 desmoglein 4.
  
     0.733
Xcel_0008
Putative FHA domain containing protein; KEGG: hypothetical protein.
  
     0.722
Xcel_2358
PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: cti:RALTA_B1874 putative transcriptional regulator, IclR.
  
     0.689
Xcel_2929
KEGG: similar to 5-amp-activated protein kinase, beta subunit.
  
     0.683
Xcel_1290
PFAM: protein of unknown function YGGT; KEGG: bbk:BARBAKC583_0327 YGGT family protein.
  
     0.671
Xcel_0791
Conserved hypothetical protein; KEGG: Phlpp; PH domain and leucine rich repeat protein phosphatase; K01090 protein phosphatase.
 
     0.621
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.