STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2154PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vsp:VS_2592 maltodextrin transport system permease protein MalD. (295 aa)    
Predicted Functional Partners:
Xcel_2152
PFAM: extracellular solute-binding protein family 1; KEGG: bcb:BCB4264_A4119 putative maltosaccharide ABC transporter, maltosaccharide-binding protein.
 
 0.997
Xcel_2153
Fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vsp:VS_2591 maltodextrin transport system permease protein MalC.
 0.996
Xcel_2162
PFAM: extracellular solute-binding protein family 1; KEGG: pmy:Pmen_3132 maltose ABC transporter periplasmic protein.
 
 0.992
Xcel_2950
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr7224 sugar ABC transportor, ATP- binding protein.
 
 0.990
Xcel_2161
Fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: apl:APL_1238 maltose transporter membrane protein.
 0.980
Xcel_2160
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A4117 maltosaccharide ABC transporter, permease protein.
  
  
 
0.916
Xcel_1370
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: esa:ESA_02713 hypothetical protein.
 
 0.906
Xcel_0409
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU28740 integral membrane protein.
 
 0.895
Xcel_2755
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3390 ABC transporter permease.
 
 0.889
Xcel_2913
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_4663 binding-protein-dependent transport systems inner membrane component.
 
 0.889
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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