STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2206Hypothetical protein. (175 aa)    
Predicted Functional Partners:
Xcel_0287
PFAM: helix-turn-helix HxlR type; KEGG: gur:Gura_3513 HxlR family transcriptional regulator.
   
    0.652
Xcel_2311
Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: azc:AZC_1286 hypothetical protein.
   
    0.652
Xcel_3335
PFAM: helix-turn-helix HxlR type; KEGG: azo:azo3515 putative transcriptional regulatory protein.
   
    0.652
Xcel_0359
KEGG: abo:ABO_1591 alpha/beta fold family hydrolase.
      0.590
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.580
Xcel_2204
PFAM: protein of unknown function DUF403; KEGG: reh:H16_A1181 hypothetical protein.
       0.551
Xcel_2205
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: azo:azo1514 hypothetical protein.
       0.551
Xcel_2203
PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: ccs:CCNA_01672 transglutaminase-like enzyme, putative cysteine.
       0.543
Xcel_1091
KEGG: hha:Hhal_1735 putative ABC transporter.
  
     0.513
Xcel_1087
KEGG: hha:Hhal_1735 putative ABC transporter.
  
   
 0.511
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.