STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2257TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: ade:Adeh_0322 peptidase M6, immune inhibitor A. (811 aa)    
Predicted Functional Partners:
Xcel_0321
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rlt:Rleg2_2358 transcriptional regulator, ArsR family.
  
     0.597
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.545
Xcel_0035
PFAM: GCN5-related N-acetyltransferase; KEGG: ppf:Pput_3213 GCN5-related N- acetyltransferase.
  
    0.513
obg
GTP-binding protein Obg/CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.475
Xcel_2340
PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: kpn:KPN_02069 L, D-carboxypeptidase A (in murein recycling).
  
     0.472
Xcel_3015
PFAM: GCN5-related N-acetyltransferase; KEGG: bvi:Bcep1808_3667 GCN5-related N- acetyltransferase.
  
     0.461
Xcel_1116
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL3033 hypothetical protein.
  
    0.428
Xcel_0322
PFAM: major facilitator superfamily MFS_1; KEGG: sit:TM1040_0869 major facilitator transporter.
  
     0.420
Xcel_3160
PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bph:Bphy_7397 TAP domain-containing protein.
  
     0.410
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.