STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2270KEGG: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase. (637 aa)    
Predicted Functional Partners:
Xcel_2269
KEGG: acr:Acry_1637 ABC transporter, transmembrane region, type 1; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
0.999
Xcel_2268
KEGG: gme:Gmet_1929 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
 
  
 0.994
Xcel_2267
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bsu:BSU38760 cytochrome bd ubiquinol oxidase (subunit I).
 
  
 0.991
Xcel_0093
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bcb:BCB4264_A1961 ABC transporter, permease/ATP-binding protein.
 
   
0.517
Xcel_2271
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: hypothetical protein.
       0.510
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.478
Xcel_2424
KEGG: similar to hedgehog protein.
  
     0.432
Xcel_2425
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
  
     0.426
Xcel_2169
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_3153 hypothetical protein.
  
     0.425
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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