STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2284Hypothetical protein; KEGG: xca:xccb100_3359 DNA polymerase III tau and gamma subunits. (152 aa)    
Predicted Functional Partners:
Xcel_1312
Hypothetical protein; KEGG: met:M446_5885 adenylate/guanylate cyclase.
  
     0.721
Xcel_3034
KEGG: hypothetical protein.
  
     0.696
Xcel_2009
PFAM: cytochrome c class I; KEGG: tbd:Tbd_2545 putative cytochrome c.
  
     0.694
Xcel_0695
Conserved hypothetical protein; KEGG: cti:RALTA_A0294 putative transmembrane cytochrome oxidase complex biogenesis factor.
  
     0.684
Xcel_2010
PFAM: Rieske [2Fe-2S] domain protein; KEGG: vei:Veis_4950 Rieske (2Fe-2S) domain protein.
  
     0.682
Xcel_0783
PFAM: aminoglycoside phosphotransferase; KEGG: eum:ECUMN_4827 macrolide 2'- phosphotransferase I.
  
     0.680
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.666
Xcel_3220
PFAM: copper resistance D domain protein; KEGG: bha:BH0892 hypothetical protein.
  
     0.663
Xcel_1476
KEGG: hypothetical protein.
  
     0.659
Xcel_1157
Hypothetical protein.
  
     0.648
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.