STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2370PFAM: GCN5-related N-acetyltransferase; KEGG: rce:RC1_0257 puromycin N-acetyltransferase, putative. (203 aa)    
Predicted Functional Partners:
Xcel_2371
PFAM: regulatory protein TetR; KEGG: hch:HCH_01207 transcriptional regulator.
       0.773
Xcel_2372
KEGG: ret:RHE_CH03475 hypothetical protein.
       0.521
Xcel_2373
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: acp:A2cp1_3552 DEAD/DEAH box helicase domain protein.
       0.459
Xcel_1928
PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: pen:PSEEN2266 hypothetical protein.
 
   0.406
Xcel_2718
PFAM: Abortive infection protein; KEGG: bat:BAS3057 CAAX amino terminal protease family protein.
  
     0.406
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.