STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2424KEGG: similar to hedgehog protein. (550 aa)    
Predicted Functional Partners:
Xcel_2423
Hypothetical protein; KEGG: vco:VC0395_A1354 HlyD family secretion protein.
     0.955
Xcel_2425
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
 
     0.847
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.772
Xcel_2819
Hypothetical protein; KEGG: mch:Mchl_4744 putative superfamily I DNA and RNA helicase protein.
  
     0.768
Xcel_2547
KEGG: hypothetical protein.
  
     0.766
Xcel_1186
Hypothetical protein.
  
     0.734
Xcel_2184
Hypothetical protein; KEGG: sus:Acid_5430 peptidase S9 prolyl oligopeptidase.
  
     0.722
Xcel_2942
Hypothetical protein; KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin.
  
     0.697
Xcel_1103
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
     0.693
Xcel_2422
PFAM: Tetratricopeptide TPR_2 repeat protein; Thioredoxin domain; KEGG: trx; thioredoxin; K05838 putative thioredoxin.
       0.679
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.