STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2426PFAM: alpha/beta hydrolase fold; KEGG: gur:Gura_0572 alpha/beta hydrolase fold. (267 aa)    
Predicted Functional Partners:
Xcel_2264
PFAM: alpha/beta hydrolase fold; KEGG: pzu:PHZ_c1271 hydrolase, alpha/beta fold family.
  
     0.724
Xcel_0784
PFAM: NUDIX hydrolase; Zinc ribbon NADH pyrophosphatase; NADH pyrophosphatase-like; KEGG: sfu:Sfum_1412 NUDIX hydrolase.
      0.700
Xcel_2427
Hydrolase of the alpha/beta superfamily-like protein; KEGG: cbd:CBUD_0236 alpha/beta hydrolase.
       0.693
Xcel_2428
Hypothetical protein.
       0.692
Xcel_1628
PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: acp:A2cp1_3368 alpha/beta hydrolase fold protein.
  
     0.626
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.572
Xcel_2429
PFAM: peptidylprolyl isomerase FKBP-type; KEGG: scl:sce7544 hypothetical protein.
   
   0.498
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.