STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2443PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_6655 short-chain dehydrogenase/reductase SDR. (309 aa)    
Predicted Functional Partners:
Xcel_2444
PFAM: regulatory protein TetR; KEGG: bbt:BBta_0873 TetR family transcriptional regulator.
 
     0.818
Xcel_2442
N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: gdi:GDI2579 putative N-acetylglucosamine-6- phosphate deacetylase.
  
  
 0.634
Xcel_0426
PFAM: sulfatase; KEGG: pzu:PHZ_c0420 arylsulfatase.
   
 
 0.595
Xcel_2767
PFAM: PfkB domain protein; KEGG: gbm:Gbem_3234 1-phosphofructokinase.
  
  
 0.577
Xcel_3244
KEGG: ank:AnaeK_2924 hypothetical protein.
   
 
 0.575
Xcel_2138
Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.534
Xcel_0099
Hypothetical protein.
    
 0.531
Xcel_1893
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.508
Xcel_2135
(Acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; KEGG: sml:Smlt1028 putative malonyl CoA-acyl carrier protein transacylase.
  
 
 0.507
nuoN
Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.
   
   0.491
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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