STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2471PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: acr:Acry_2318 ABC-type sugar transport system periplasmic component-like protein. (331 aa)    
Predicted Functional Partners:
Xcel_2473
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2316 ABC transporter related.
 
 0.997
Xcel_2472
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: acr:Acry_2317 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.976
Xcel_1263
PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: gbm:Gbem_0731 response regulator receiver modulated serine phosphatase.
   
 
 0.757
Xcel_0750
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter.
 
 
 0.713
Xcel_2400
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_1507 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.633
Xcel_0421
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: scl:sce3306 ribose/xylose/arabinose/galactoside ABC-type transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.579
Xcel_0422
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rpi:Rpic_4098 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.579
Xcel_0882
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1213 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 
 0.579
Xcel_0257
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
  
 
 0.550
Xcel_0405
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0839 ABC transporter related.
  
 
 0.550
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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