STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2472Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: acr:Acry_2317 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (347 aa)    
Predicted Functional Partners:
Xcel_2473
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2316 ABC transporter related.
 
 0.977
Xcel_2471
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: acr:Acry_2318 ABC-type sugar transport system periplasmic component-like protein.
 
 
 0.976
Xcel_0419
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator.
 
 0.900
Xcel_0750
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter.
 
 0.832
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.665
Xcel_2401
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_5039 ABC transporter related.
 
 0.662
Xcel_2399
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mll1012 periplasmic ribose-binding protein.
 
 
 0.652
Xcel_0420
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_4809 ABC transporter related.
 
 0.607
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
 0.599
Xcel_0405
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0839 ABC transporter related.
 
 0.586
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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