STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2490KEGG: mms:mma_0681 acyl-CoA thioesterase I precursor. (201 aa)    
Predicted Functional Partners:
Xcel_1476
KEGG: hypothetical protein.
  
     0.774
Xcel_2933
KEGG: SNF2 superfamily protein.
 
 
 0.770
Xcel_0783
PFAM: aminoglycoside phosphotransferase; KEGG: eum:ECUMN_4827 macrolide 2'- phosphotransferase I.
 
     0.744
Xcel_1023
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rle:RL0458 putative adenylate cyclase.
  
     0.593
Xcel_3034
KEGG: hypothetical protein.
  
     0.593
Xcel_3363
PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_4891 hydrolase, NUDIX family; Belongs to the Nudix hydrolase family.
 
     0.590
Xcel_2489
PFAM: Aldose 1-epimerase; KEGG: esa:ESA_04055 hypothetical protein.
       0.565
Xcel_3376
PFAM: 60 kDa inner membrane insertion protein; KEGG: bha:BH1169 stage III sporulation protein J.
  
     0.547
Xcel_0010
KEGG: Hypothetical protein CBG04830.
  
    0.539
Xcel_2036
KEGG: hypothetical protein.
  
     0.537
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.