STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2512KEGG: ppg:PputGB1_0845 hypothetical protein. (573 aa)    
Predicted Functional Partners:
Xcel_2513
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase.
  
 0.973
Xcel_2514
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF.
     
 0.812
Xcel_2515
KEGG: mxa:MXAN_3266 hypothetical protein.
 
     0.730
Xcel_2516
KEGG: bha:BH0729 hypothetical protein.
 
     0.700
Xcel_2517
KEGG: scl:sce1390 hypothetical protein.
 
     0.694
Xcel_0010
KEGG: Hypothetical protein CBG04830.
  
     0.672
Xcel_2508
KEGG: hha:Hhal_0964 competence protein F.
 
     0.660
Xcel_2519
PFAM: protein of unknown function DUF58; KEGG: mxa:MXAN_4679 hypothetical protein.
       0.647
Xcel_3364
Hypothetical protein; KEGG: GH15499 gene product from transcript GH15499- RA.
  
     0.647
Xcel_0325
KEGG: ank:AnaeK_3451 hypothetical protein.
  
     0.597
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.