STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2519PFAM: protein of unknown function DUF58; KEGG: mxa:MXAN_4679 hypothetical protein. (473 aa)    
Predicted Functional Partners:
Xcel_2516
KEGG: bha:BH0729 hypothetical protein.
 
  
 0.963
Xcel_2517
KEGG: scl:sce1390 hypothetical protein.
 
  
 0.963
Xcel_2515
KEGG: mxa:MXAN_3266 hypothetical protein.
 
     0.957
Xcel_2518
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: hne:HNE_1205 AAA family ATPase.
  
 0.944
Xcel_2521
PFAM: protein of unknown function DUF95 transmembrane; KEGG: mxa:MXAN_3115 hypothetical protein.
 
  
 0.832
Xcel_2522
PFAM: RDD domain containing protein; KEGG: smt:Smal_3843 RDD domain containing protein.
 
    0.792
purD
TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: predicted protein; K01945 phosphoribosylamine- -glycine ligase; Belongs to the GARS family.
      
 0.662
Xcel_2512
KEGG: ppg:PputGB1_0845 hypothetical protein.
       0.647
Xcel_2513
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase.
       0.613
Xcel_0359
KEGG: abo:ABO_1591 alpha/beta fold family hydrolase.
   
    0.609
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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