STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_2523KEGG: afw:Anae109_4393 membrane protein. (417 aa)    
Predicted Functional Partners:
Xcel_2525
PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: acp:A2cp1_2171 histidine kinase.
 
     0.664
Xcel_0117
Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: bpa:BPP2679 hypothetical protein.
  
    0.649
Xcel_0381
Hypothetical protein; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein.
  
     0.641
Xcel_2431
Hypothetical protein.
  
     0.641
Xcel_2435
KEGG: gdi:GDI0760 hypothetical protein.
  
     0.579
Xcel_2524
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: mpt:Mpe_A3494 two component LuxR family transcriptional regulator.
 
     0.574
Xcel_3158
Hypothetical protein; KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein.
  
     0.529
Xcel_0699
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_1921 protein of unknown function DUF214.
  
     0.500
Xcel_2548
KEGG: sus:Acid_6302 glycosyl transferase family protein.
 
   
 0.464
Xcel_1968
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rde:RD1_1973 ABC transporter, ATP-binding protein, putative.
  
     0.441
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.